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Links from GEO DataSets

Items: 13

1.

Genomic analysis for hematopoietic stem and progenitors cells (HSPC) generated in vitro according to ex vivo expansion protocols and their comparison with HSPC obtained fresh

(Submitter supplied) Expansion for hematopoietic cells from umbilical cord blood is a strategy for use this cell source in clinic transplants, however, it is important to know about the genomic changes that can occur in expanded cells. In order to detect global expression profiles changes in hematopoietic stem and progenitors cells generated in vitro, we analyzed hematopoietics populations obtained by FACS in fresh from umbilical cord blood. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL17586
19 Samples
Download data: CEL, CHP
Series
Accession:
GSE107497
ID:
200107497
2.

Lin-, CD38-, CD34+ Hematopoietic Stem Cells.

(Submitter supplied) Lin-, CD38-, CD34+ hematopoietic stem cells. Keywords: other
Organism:
Homo sapiens
Type:
Expression profiling by array
Platforms:
GPL96 GPL97
6 Samples
Download data: CEL, EXP
Series
Accession:
GSE3788
ID:
200003788
3.

Development of gene expression signatures for SL-13R

(Submitter supplied) To further development of our gene expression, we have employed whole genome microarray expression profiling. Human cord blood CD34+ cells from healthy donors was cultured for 2 days with or without SL-13R.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL17077
2 Samples
Download data: TXT
Series
Accession:
GSE167599
ID:
200167599
4.

Expression data from human CD34+ HPC subpopulations isolated from umbilical cord blood (Haddad et al. Blood 104:3918, 2004)

(Submitter supplied) We used microarrays to analyze the gene expression profile of CD34+CD45RA+CD7+, CD34+CD45RA+CD10+CD19- and CD34+CD45+CD7-CD10-CD19- HPCs isolated from umbilical cord blood CD34+CD45RA+CD7+(CD10-) and CD34+CD45RA+CD10+(CD7-CD19-) HPCs correspond respectively to prothymocytes and early pre-proB precursors. CD34+CD45RA+CD7-CD10-CD19- HPCs correspond to lympho-granulo-macrophagic precursors
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL96
8 Samples
Download data: CEL
Series
Accession:
GSE29522
ID:
200029522
5.

Expression data from human hematopoietic stem cells with different culture systems

(Submitter supplied) To date, different experimental strategies have been developed for the ex vivo expansion of human hematopoietic stem (HSCs) in clinical application. However, it is still unclear to what difference in genomic function in HSCs expansion under different culture systems. In this study, we compared gene-expression profile of ex vivo expanded serum (10% FBS, fetal bovine serum) and serum-free culture systems, and then analyze molecular function of differentially expressed gene using microarray chips.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL16686
4 Samples
Download data: CEL
Series
Accession:
GSE126909
ID:
200126909
6.

Human Hematopoietic Stem Cell (HSC) and Progenitor Cell (HPC) Expression Profilies

(Submitter supplied) The global gene expression profiles of human umbilical cord blood and adult bone marrow CD34+CD33-CD38-Rho(lo)c-kit+ cells, enriched for hematopoietic stem/progenitor cells (HSC) with CD34+CD33-CD38-Rho(hi) cells, enriched in committed hematopoietic progenitor cells (HPC), were compared to identify candidate regulators of HSC self-renewal versus differentiation fate decisions. Keywords: parallel sample
Organism:
Homo sapiens
Type:
Expression profiling by array
Datasets:
GDS1230 GDS1231
Platforms:
GPL97 GPL96
36 Samples
Download data: CEL, EXP
Series
Accession:
GSE2666
ID:
200002666
7.
Full record GDS1231

Hematopoietic stem cell and progenitor cell comparison (HG-U133B)

Comparison of CD34+CD33-CD38-Rho(lo)c-kit+ cells, enriched for hematopoietic stem/progenitor cells (HSC), to CD34+CD33-CD38-Rho(hi) cells, enriched for committed hematopoietic progenitor cells (HPC). Cells obtained from umbilical cord blood and bone marrow. Provides insight into control of HSC fate.
Organism:
Homo sapiens
Type:
Expression profiling by array, count, 2 cell type, 2 tissue sets
Platform:
GPL97
Series:
GSE2666
18 Samples
Download data: CEL, EXP
8.
Full record GDS1230

Hematopoietic stem cell and progenitor cell comparison (HG-U133A)

Comparison of CD34+CD33-CD38-Rho(lo)c-kit+ cells, enriched for hematopoietic stem/progenitor cells (HSC), to CD34+CD33-CD38-Rho(hi) cells, enriched for committed hematopoietic progenitor cells (HPC). Cells obtained from umbilical cord blood and bone marrow. Provides insight into control of HSC fate.
Organism:
Homo sapiens
Type:
Expression profiling by array, count, 2 cell type, 2 tissue sets
Platform:
GPL96
Series:
GSE2666
18 Samples
Download data: CEL, EXP
9.

scRNASeq of splenic CD3+ cells from immunodeficient mice injected with progenitor T-cells generated from naïve, non-expanded or SR1-expanded human cord blood-derived CD34+ cells

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
4 Samples
Download data: CSV, MTX, TSV
Series
Accession:
GSE135929
ID:
200135929
10.

3' V(D)J scRNASeq of splenic CD3+ cells from immunodeficient mice injected with progenitor T-cells generated from naïve, non-expanded or SR1-expanded human cord blood-derived CD34+ cells

(Submitter supplied) We report the gene expression profile of single cell peripheral CD3+ cells from immunodeficient mice injected with human progenitor T-cells (proT-cells). ProT-cell subsets were generated in vitro using human umbilical cord blood-derived CD34+ cells that were either non-expanded (naive), or expanded in vitro with the hydrocarbon receptor antagonist, StemRegenin-1 (SR1).
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
2 Samples
Download data: CSV
Series
Accession:
GSE135928
ID:
200135928
11.

5' scRNAseq of splenic CD3+ cells from immunodeficient mice injected with progenitor T-cells generated from naïve, non-expanded or SR1-expanded human cord blood-derived CD34+ cells

(Submitter supplied) We report the gene expression profile of single cell peripheral CD3+ cells from immunodeficient mice injected with human progenitor T-cells (proT-cells). ProT-cell subsets were generated in vitro using human umbilical cord blood-derived CD34+ cells that were either non-expanded (naive), or expanded in vitro with the hydrocarbon receptor antagonist, StemRegenin-1 (SR1).
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
2 Samples
Download data: MTX, TSV
Series
Accession:
GSE135927
ID:
200135927
12.

Transcriptome data of uncultured and HGFs along with 0.1% DMSO or LY plus Rapa or SR1-treated hUCB CD34+ cells

(Submitter supplied) mRNA profiling of uncultured and HGFs along with 0.1% DMSO (HGFs) or LY plus Rapa (LR) or SR1-treated hUCB CD34+ cells
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20795
4 Samples
Download data: TXT
13.

Identification of the chemokine CCL28 as a growth and survival factor for human hematopoietic stem- and progenitor cells

(Submitter supplied) To discover novel growth factors for hematopoietic stem- and progenitor cells (HSPCs), we have assessed cytokine responses of cord blood (CB)-derived CD34+ cells in a high-content growth factor screen. We identify the immunoregulatory chemokine (C-C motif) ligand 28 (CCL28) as a novel growth factor that directly stimulates proliferation of primitive hematopoietic cells from different ontogenetic origins. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL570
9 Samples
Download data: CEL
Series
Accession:
GSE45136
ID:
200045136
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