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Links from GEO DataSets

Items: 11

1.

In utero exposure to diesel exhaust particulates is associated with alterations of the neonatal cardiomyocyte transcriptome, metabolic parturbation and a global decrease in DNA methylation. [RNA-Seq]

(Submitter supplied) Developmental exposure to particulate matter air pollution is harmful to cardiovascular health, but the mechanisms by which this exposure mediates susceptibility to heart disease is poorly understood. We have previously shown, in a mouse model, that gestational exposure to diesel exhaust results in increased cardiac hypertrophy, fibrosis and susceptibility to heart failure in the adult offspring following transverse aortic constriction. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL17021
8 Samples
Download data: TXT
Series
Accession:
GSE110748
ID:
200110748
2.

In utero exposure to diesel exhaust particulates is associated with alterations of the neonatal cardiomyocyte transcriptome, metabolic parturbation and a global decrease in DNA methylation.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platform:
GPL17021
16 Samples
Download data: COV
Series
Accession:
GSE110793
ID:
200110793
3.

In utero exposure to diesel exhaust particulates is associated with alterations of the neonatal cardiomyocyte transcriptome, metabolic parturbation and a global decrease in DNA methylation. [RRBS]

(Submitter supplied) Developmental exposure to particulate matter air pollution is harmful to cardiovascular health, but the mechanisms by which this exposure mediates susceptibility to heart disease is poorly understood. We have previously shown, in a mouse model, that gestational exposure to diesel exhaust results in increased cardiac hypertrophy, fibrosis and susceptibility to heart failure in the adult offspring following transverse aortic constriction. more...
Organism:
Mus musculus
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL17021
8 Samples
Download data: COV
Series
Accession:
GSE110792
ID:
200110792
4.

In utero exposure to diesel exhaust particulates is associated with an altered cardiac transcriptional response to transverse aortic constriction and altered DNA methylation.

(Submitter supplied) In utero exposure to diesel exhaust particulates has been associated with increased adult susceptibility to heart failure in mice but the mechanisms by which this exposure promotes susceptibility are poorly understood. To identify potential transcriptional effects that mediate this susceptibility, we have performed RNA-seq analysis on adult hearts from mice exposed to diesel exhaust in utero and that have subsequently undergone transverse aortic constriction. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18635
12 Samples
Download data: TXT
Series
Accession:
GSE91398
ID:
200091398
5.

Short-term exposure to diesel exhaust is associated with dynamic changes in DNA methylation of circulating mononuclear cells in asthmatics

(Submitter supplied) DNA methylation in asthmatics after short-term exposure to diesel exhaust
Organism:
Homo sapiens
Type:
Methylation profiling by array
Platform:
GPL13534
96 Samples
Download data: TXT
Series
Accession:
GSE56553
ID:
200056553
6.

In utero exposure to diesel exhaust and its effect on placental transcriptional response in rabbit F2 generation

(Submitter supplied) Atmospheric pollution is a rising concern in urban areas and a major contributor to people’s mortality, with potential intergenerational consequences. Our aim was to evaluate the effects of exposure of pregnant F0 females to diluted diesel exhaust (DE) on feto-placental development in the second generation (F2). These rabbits were exposed to diluted and filtered DE (E: exposed group) or clean air (C: Control group) for 2h/day, 5days/week by nose-only exposure from 3rd to 27th days post-conception (dpc). more...
Organism:
Oryctolagus cuniculus
Type:
Expression profiling by array
Platform:
GPL18913
16 Samples
Download data: TXT
Series
Accession:
GSE109831
ID:
200109831
7.

Next-Generation Sequencing Identifies Differentially Expressed Genes in Embryonic Hearts Following Caffeine Treatment

(Submitter supplied) Purpose: This study aimed to identify differentially expressed genes including alternative splice variants in embryonic ventricles following in utero caffeine treatment. Methods: Pregnant CD-1 mice were injected with 20 mg/kg of caffeine or vehicle control daily from embryonic day (E) 6.5-9.5. On E10.5, total RNA was isolated from embryonic ventricles and used for transcriptomic RNA sequencing with Illumina HiSeq 2000 (1X75bp). more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13112
5 Samples
Download data: TXT
Series
Accession:
GSE56902
ID:
200056902
8.

In vivo endothelial transcriptomic responses to diesel engine exhaust are potentiated by hypercholesterolemia

(Submitter supplied) By means of Operon V3 microarrrays, the in vivo, aortic endothelial transcriptomic responses to chronic (30 day) whole body exposure to diesel exhaust were assessed in wild type and Apo E (-/-) mice. The in vitro response of cultured Svec 4-10 cells exposed to a soluble extract extract of diesel engine particulate were similarly assessed.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL7450
10 Samples
Download data: GPR
Series
Accession:
GSE13160
ID:
200013160
9.

RNAseq analysis of PM2.5 treated mouse cardiomyocyte cell line

(Submitter supplied) We report the gene expression profile in mouse cardiomyocyte cell line after treatment of PM2.5.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24247
9 Samples
Download data: XLSX
Series
Accession:
GSE211949
ID:
200211949
10.

Inflammatory response to titanium dioxide particles exposure is enhanced during pregnancy

(Submitter supplied) Rationale: Maternal immune responses can promote allergy development in offspring. Pilot data show that neonates of mother mice exposed during pregnancy to air pollution particles have increased allergic susceptibility. Objective: We investigated whether inflammatory response to titanium dioxide (TiO2) particles earlier considered immunologically ‘inert’ is enhanced during pregnancy. Methods: Pregnant BALB/c mice (or non-pregnant controls) received particle suspensions intranasally at day 14 of pregnancy. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS2878
Platform:
GPL1261
16 Samples
Download data: CEL, CHP
Series
Accession:
GSE7475
ID:
200007475
11.
Full record GDS2878

Inert particles effect on the lungs of pregnant females

Analysis of lungs from pregnant and non-pregnant BALB/c females following insufflation with inert titanium dioxide particles. Results provide insight into the mechanisms underlying the differences in response between pregnant and non-pregnant females to inhaled inert particles.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 agent, 2 development stage sets
Platform:
GPL1261
Series:
GSE7475
16 Samples
Download data: CEL, CHP
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