GEO DataSets

(Submitter supplied) Cell cycle regulation is of paramount importance for all forms of life. Here we report that a conserved and essential cell cycle-specific transcription factor (designated as aCcr1) and its viral homologs control cell division in Sulfolobales. We show that the transcription level of accr1 reaches peak during active cell division (D-phase) subsequent to the expression of CdvA, an archaea-specific cell division protein. more...

Organism:

Sulfolobus islandicus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32733

6 Samples

Download data: XLS

(Submitter supplied) Cell cycle regulation is of paramount importance for all forms of life. Here we report that a conserved and essential cell cycle-specific transcription factor (designated as aCcr1) and its viral homologs control cell division in Sulfolobales. We show that the transcription level of accr1 reaches peak during active cell division (D-phase) subsequent to the expression of CdvA, an archaea-specific cell division protein. more...

Organism:

Sulfolobus islandicus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32733

18 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Sulfolobus islandicus

Type:

Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL32733

9 Samples

Download data: BW

(Submitter supplied) Cell cycle regulation is of paramount importance for all forms of life. Here we report that a conserved and essential cell cycle-specific transcription factor (designated as aCcr1) and its viral homologs control cell division in Sulfolobales. We show that the transcription level of accr1 reaches peak during active cell division (D-phase) subsequent to the expression of CdvA, an archaea-specific cell division protein. more...

Organism:

Sulfolobus islandicus

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL32733

3 Samples

Download data: BW

(Submitter supplied) Precise control of the cell cycle is central to the physiology of all cells. In prior work we demonstrated that archaeal cells maintain a constant cell size; however, the regulatory mechanisms underlying the cell cycle remain unexplored in this domain of life. In this study we use genetics, functional genomics, and quantitative imaging to identify and characterize the CdrSL gene regulatory network in a model species of archaea. more...

Organism:

Halobacterium salinarum

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL28343

16 Samples

Download data: BED, WIG

(Submitter supplied) Transcriptome sequencing was carried out with an Illumina HiSeq platform to investigate the differently expressed genes in wide type strain E233S1 and tfb3 gene deletion mutant ∆tfb3 with or without 2 µM NQO treatment for 6 hours.

Organism:

Sulfolobus islandicus REY15A

Type:

Expression profiling by high throughput sequencing

Platform:

GPL24667

4 Samples

Download data: XLSX

(Submitter supplied) The goals of this study are to compare NGS-derived transcriptome profiling (RNA-seq) of H. volcanii upon treatment of NaOCl.

Organism:

Haloferax volcanii

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32293

30 Samples

Download data: XLSX