GEO DataSet Links for SRA (Select 140267) - GEO DataSets

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Items: 2

Select item 3008806191.

prfA_deletion_37C_TAP

Organism:: Listeria monocytogenes EGD-e

Source name:: prfA_deletion_37C_TAP

Platform:: GPL15272
Series:: GSE36060

Download data: TXT

Sample

Accession:: GSM880619

ID:: 300880619

SRA Run Selector

Select item 2000360602.

Comparative transcriptomics of pathogenic and non-pathogenic Listeria species

(Submitter supplied) Listeria monocytogenes is a human, food-borne pathogen. Genomic comparisons between L. monocytogenes and Listeria innocua, a closely related non-pathogenic species, were pivotal in the identification of protein coding genes essential for virulence. However, no comprehensive comparison has focused on the non-coding genome. We used strand-specific cDNA sequencing to produce genome-wide transcription start site (TSS) maps for both organisms, and developed a publicly available integrative browser to visualize and analyze both transcriptomes in different growth conditions and genetic backgrounds. more...