GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Psychotria revoluta; Homalium betulifolium; Psychotria semperflorens; Leucocroton havanensis; Geissois pruinosa; [Phyllanthus] conjugatus var. ducosensis; Thlaspi montanum; Psychotria grandis; Lasiocroton microphyllus; Psychotria costivenia; Psychotria gabriellae; Homalium kanaliense; Phyllanthus luciliae; Noccaea caerulescens; Geissois racemosa

Type:

Expression profiling by high throughput sequencing

15 related Platforms

43 Samples

Download data: CSV

(Submitter supplied) The leaf transcriptome of the nickel hyperaccumulator specie Noccaea caerulescens subsp. fimiensis living on serpentine soils were compared to the closely related non-nickel-accumulators Noccaea caerulescens "Viviez" growing on a zinc mining site and Noccaea montana living on serpentine soil, to identity differentially expressed genes potentially involved in Ni hyperaccumulation.

Organism:

Thlaspi montanum; Noccaea caerulescens

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL25153 GPL25154

10 Samples

Download data: CSV, FASTA

(Submitter supplied) Root transcriptomes were sequenced using SOLiD 4 chemistry. The three accessions LC, GA and MP differed significantly in the expression of genes that contribute to metal ion transport and detoxification, stress tolerance and secondary metabolite biosynthesis. These data provide comprehensive genome-wide view to the root processes in several N. caerulescens accessions and highlight differences that potentially facilitate adaptation to various metalliferous soils.

Organism:

Noccaea caerulescens

Type:

Expression profiling by high throughput sequencing

Platform:

GPL15250

9 Samples

Download data: TXT