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si:dkey-32e6.3 si:dkey-32e6.3 [ Danio rerio (zebrafish) ]

Gene ID: 100001663, updated on 12-Sep-2024

Summary

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Official Symbol
si:dkey-32e6.3provided by ZNC
Official Full Name
si:dkey-32e6.3provided by ZNC
Primary source
ZFIN:ZDB-GENE-081104-408
See related
Ensembl:ENSDARG00000092934 AllianceGenome:ZFIN:ZDB-GENE-081104-408
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See si:dkey-32e6.3 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (20136938..20143253, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (20210590..20216936, complement)

Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene transketolase b Neighboring gene leucine rich repeat containing 23 Neighboring gene ubiquitin specific peptidase 19 Neighboring gene laminin, beta 2 (laminin S)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Genome-Wide Identification of Laminin Family Related to Follicular Pseudoplacenta Development in Black Rockfish (Sebastes schlegelii). Zhao N, et al. Int J Mol Sci, 2022 Sep 10. PMID 36142434, Free PMC Article
  2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein si:dkey-32e6.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007134.7 Reference GRCz11 Primary Assembly

    Range
    20136938..20143253 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001341580.9 → XP_001341616.1  uncharacterized protein si:dkey-32e6.3

    UniProtKB/TrEMBL
    A0A8M1Q7M6, B7ZDB0
    Related
    ENSDARP00000121281.1, ENSDART00000142256.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials