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spata2l spermatogenesis associated 2-like [ Danio rerio (zebrafish) ]

Gene ID: 100003387, updated on 4-Jan-2025

Summary

Official Symbol
spata2lprovided by ZNC
Official Full Name
spermatogenesis associated 2-likeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-070705-402
See related
AllianceGenome:ZFIN:ZDB-GENE-070705-402
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-238o13.3
Summary
Orthologous to human SPATA2L (spermatogenesis associated 2 like). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See spata2l in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (14684107..14688438)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (14715609..14719926)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene UTP4 small subunit processome component Neighboring gene VPS9 domain containing 1 Neighboring gene si:dkey-238o13.4 Neighboring gene peptide deformylase, mitochondrial Neighboring gene URI1 prefoldin like chaperone

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
spermatogenesis associated 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001386847.1NP_001373776.1  spermatogenesis associated 2-like

    Status: VALIDATED

    Source sequence(s)
    CT025859
    UniProtKB/TrEMBL
    A0A8M6Z232

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    14684107..14688438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)