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RNA28SN5 RNA, 28S ribosomal N5 [ Homo sapiens (human) ]

Gene ID: 100008589, updated on 10-Dec-2024

Summary

Official Symbol
RNA28SN5provided by HGNC
Official Full Name
RNA, 28S ribosomal N5provided by HGNC
Primary source
HGNC:HGNC:53532
See related
AllianceGenome:HGNC:53532
Gene type
rRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN28S1; RNA28S5
Summary
45S ribosomal DNA (rDNA) arrays, or clusters, are present on human chromosomes 13, 14, 15, 21 and 22, designated RNR1 through RNR5, respectively. Each cluster consists of multiple 45S rDNA repeat units that vary in number among individuals and chromosomes, with total diploid copy number estimates ranging from 60 to >800 repeat units in a human genome. The 45S rDNA repeat unit encodes a 45S rRNA precursor, transcribed by RNA polymerase I, which is processed to form the 18S, 5.8S and 28S rRNAs. This gene is a representative copy of the 28S ribosomal RNA whose chromosomal location is unknown. [provided by RefSeq, Mar 2017]
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Genomic context

See RNA28SN5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) Unplaced Scaffold NT_167214.1 (113348..118417)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) Unplaced Scaffold NT_167214.1 (113348..118417)

NT_167214.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100507412 Neighboring gene RNA, 45S pre-ribosomal N5 Neighboring gene RNA, 18S ribosomal N5 Neighboring gene RNA, 5.8S ribosomal N5 Neighboring gene cell division cycle 27 homolog pseudogene Neighboring gene origin of replication in ribosomal DNA intergenic spacer Neighboring gene RNA, 18S ribosomal pseudogene 3

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • 28S rRNA 5
  • 28S ribosomal RNA
  • RNA, 28S ribosomal 1
  • RNA, 28S ribosomal 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003287.4 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL592188

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NT_167214.1 Reference GRCh38.p14 Primary Assembly

    Range
    113348..118417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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