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Gm3002 predicted gene 3002 [ Mus musculus (house mouse) ]

Gene ID: 100040852, updated on 17-Aug-2024

Summary

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Official Symbol
Gm3002provided by MGI
Official Full Name
predicted gene 3002provided by MGI
Primary source
MGI:MGI:3781180
See related
AllianceGenome:MGI:3781180
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in CNS E18 (RPKM 4.3), CNS E14 (RPKM 3.1) and 12 other tissues See more
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Genomic context

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See Gm3002 in Genome Data Viewer
Location:
14 A2; 14 2.08 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (18639090..18654860, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (3814913..3830683)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 7 pseudogene Neighboring gene alpha28-takusan pseudogene Neighboring gene predicted gene 3050 Neighboring gene predicted gene, 46463 Neighboring gene ribosomal protein L3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • alpha-takusan pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033388.2 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC192473, AC193220

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    18639090..18654860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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