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Gm3434 predicted gene 3434 [ Mus musculus (house mouse) ]

Gene ID: 100041618, updated on 17-Aug-2024

Summary

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Official Symbol
Gm3434provided by MGI
Official Full Name
predicted gene 3434provided by MGI
Primary source
MGI:MGI:3781612
See related
Ensembl:ENSMUSG00000098390 AllianceGenome:MGI:3781612
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward genital fat pad adult (RPKM 12.5) See more
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Genomic context

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See Gm3434 in Genome Data Viewer
Location:
9 A4; 9 20.63 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (36045583..36046926, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (36134287..36135630, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_23775 Neighboring gene prostate and testis expressed 13 Neighboring gene STARR-seq mESC enhancer starr_23776 Neighboring gene STARR-seq mESC enhancer starr_23777 Neighboring gene STARR-seq mESC enhancer starr_23778 Neighboring gene STARR-seq mESC enhancer starr_23779 Neighboring gene predicted gene 5916 Neighboring gene predicted gene 3867 Neighboring gene prostate and testis expressed 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. The transcriptional landscape of the mammalian genome. Carninci P, et al. Science, 2005 Sep 2. PMID 16141072

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • prostate and testis expressed family member

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_030729.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC154630
    Related
    ENSMUST00000183877.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    36045583..36046926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.