Speer4f2 spermatogenesis associated glutamate (E)-rich protein 4f2 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Speer4f2provided by MGI
Official Full Name: spermatogenesis associated glutamate (E)-rich protein 4f2provided by MGI
Primary source: MGI:MGI:3781672
See related: Ensembl:ENSMUSG00000091827 AllianceGenome:MGI:3781672
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Gm3495; Gm3535; 100041832
Expression: Restricted expression toward testis adult (RPKM 4.4) See more
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Genomic context

Location:: 5 A3; 5 7.96 cM

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	5	NC_000071.7 (17578184..17582990)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	5	NC_000071.6 (17373186..17377992)

Chromosome 5 - NC_000071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: spermatogenesis associated glutamate (E)-rich protein 4f2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001374718.1 → NP_001361647.1 spermatogenesis associated glutamate (E)-rich protein 4f2

Status: VALIDATED

Source sequence(s)

AC084416

Consensus CDS

CCDS89881.1

UniProtKB/TrEMBL

E9Q366

Related

ENSMUSP00000129818.3, ENSMUST00000166086.3

Conserved Domains (3) summary

PHA03247
Location:202 → 278

PHA03247; large tegument protein UL36; Provisional

COG1196
Location:94 → 220

Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

pfam04822
Location:50 → 128

Takusan