Gapdh-ps15 glyceraldehyde-3-phosphate dehydrogenase, pseudogene 15 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Gapdh-ps15provided by MGI
Official Full Name: glyceraldehyde-3-phosphate dehydrogenase, pseudogene 15provided by MGI
Primary source: MGI:MGI:5434255
See related: Ensembl:ENSMUSG00000096438 AllianceGenome:MGI:5434255
Gene type: pseudo
RefSeq status: INFERRED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Gm20899
Summary: Predicted to enable aspartic-type endopeptidase inhibitor activity; disordered domain specific binding activity; and identical protein binding activity. Predicted to be involved in several processes, including defense response to other organism; negative regulation of protein metabolic process; and positive regulation of canonical NF-kappaB signal transduction. Predicted to be located in several cellular components, including cytosol; lipid droplet; and nuclear membrane. Predicted to be part of GAIT complex and ribonucleoprotein complex. Human ortholog(s) of this gene implicated in Alzheimer's disease. Orthologous to human GAPDH (glyceraldehyde-3-phosphate dehydrogenase). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

Location:: Y; Y B

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	Y	NC_000087.8 (38575074..38576317)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	Y	NC_000087.7 (38619739..38620971)

Chromosome Y - NC_000087.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

PMC150876P1 (e-PCR)
- UniSTS:271114

PMC156256P2 (e-PCR)
- UniSTS:271388

GAPD (e-PCR)
- UniSTS:266277

PMC133555P1 (e-PCR)
- UniSTS:270633

Gapdh (e-PCR), detects polymorphism
- UniSTS:506924

PMC122568P2 (e-PCR)
- UniSTS:270398

PMC133764P1 (e-PCR)
- UniSTS:270654

PMC122612P1 (e-PCR)
- UniSTS:270402

PMC186377P1 (e-PCR)
- UniSTS:271702

Gapd (e-PCR)
- UniSTS:254295

PMC109593P1 (e-PCR)
- UniSTS:270172

Gapdh (e-PCR), detects polymorphism
- UniSTS:516197

G65758 (e-PCR)
- UniSTS:225899

PMC303337P3 (e-PCR)
- UniSTS:272495

PMC193571P1 (e-PCR)
- UniSTS:271750

GDB:376732 (e-PCR)
- UniSTS:157065

PMC152933P3 (e-PCR)
- UniSTS:271246

PMC112637P1 (e-PCR)
- UniSTS:270236

PMC316856P1 (e-PCR)
- UniSTS:273053

PMC112647P2 (e-PCR)
- UniSTS:270238

PMC112724P1 (e-PCR)
- UniSTS:270242

PMC114224P2 (e-PCR)
- UniSTS:270263

PMC135988P15 (e-PCR)
- UniSTS:270787

PMC128021P1 (e-PCR)
- UniSTS:270562

PMC26839P1 (e-PCR)
- UniSTS:272355

Gapdh (e-PCR), detects polymorphism
- UniSTS:532456

PMC128235P1 (e-PCR)
- UniSTS:270574

PMC327192P1 (e-PCR)
- UniSTS:273135

PMC15575P1 (e-PCR)
- UniSTS:271350

PMC97911P1 (e-PCR)
- UniSTS:273660

PMC329392P1 (e-PCR)
- UniSTS:273149

PMC98059P1 (e-PCR)
- UniSTS:273662

PMC150799P1 (e-PCR)
- UniSTS:271103

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables aspartic-type endopeptidase inhibitor activity	ISO Inferred from Sequence Orthology more info
enables disordered domain specific binding	ISO Inferred from Sequence Orthology more info
enables identical protein binding	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide	ISO Inferred from Sequence Orthology more info
involved_in cellular response to type II interferon	ISO Inferred from Sequence Orthology more info
involved_in defense response to fungus	ISO Inferred from Sequence Orthology more info
involved_in killing by host of symbiont cells	ISO Inferred from Sequence Orthology more info
involved_in killing of cells of another organism	ISO Inferred from Sequence Orthology more info
involved_in negative regulation of endopeptidase activity	ISO Inferred from Sequence Orthology more info
involved_in negative regulation of translation	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of canonical NF-kappaB signal transduction	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of cytokine production	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of type I interferon production	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
part_of GAIT complex	ISO Inferred from Sequence Orthology more info
located_in cytoplasm	ISO Inferred from Sequence Orthology more info
located_in cytosol	ISO Inferred from Sequence Orthology more info
located_in intracellular membrane-bounded organelle	ISO Inferred from Sequence Orthology more info
located_in lipid droplet	ISO Inferred from Sequence Orthology more info
located_in nuclear membrane	ISO Inferred from Sequence Orthology more info
located_in nucleus	ISO Inferred from Sequence Orthology more info
located_in plasma membrane	ISO Inferred from Sequence Orthology more info
part_of ribonucleoprotein complex	ISO Inferred from Sequence Orthology more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.