H2al1a H2A histone family member L1A [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: H2al1aprovided by MGI
Official Full Name: H2A histone family member L1Aprovided by MGI
Primary source: MGI:MGI:3714114
See related: Ensembl:ENSMUSG00000100626 AllianceGenome:MGI:3714114
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: H2AL1; H2al1c; H2al1d; H2al1f; H2al1g; H2al1h; H2al1i; Gm14483; H2A.L.1
Summary: Acts upstream of or within chromosome organization. Located in nucleus and pericentric heterochromatin. Orthologous to human H2AL3 (H2A.L variant histone 3). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

Location:: X A1.1; X 6.03 cM

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	X	NC_000086.8 (11165496..11165996)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	X	NC_000086.7 (11299257..11299757)

Chromosome X - NC_000086.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within chromosome organization	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed
located_in pericentric heterochromatin	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: histone H2A-like 1

Names: histone H2Alike 1; histone cluster 2 family member

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001111037.1 → NP_001104507.1 histone H2A-like 1

See identical proteins and their annotated locations for NP_001104507.1

Status: PROVISIONAL

Source sequence(s)

BC087913

Consensus CDS

CCDS53003.1

UniProtKB/Swiss-Prot

Q5M8Q2

Related

ENSMUSP00000140925.2, ENSMUST00000188439.2

Conserved Domains (1) summary

cl25693
Location:50 → 94

H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...