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Gm14410 predicted gene 14410 [ Mus musculus (house mouse) ]

Gene ID: 100043403, updated on 27-Nov-2024

Summary

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Official Symbol
Gm14410provided by MGI
Official Full Name
predicted gene 14410provided by MGI
Primary source
MGI:MGI:3709158
See related
Ensembl:ENSMUSG00000078870 AllianceGenome:MGI:3709158
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in subcutaneous fat pad adult (RPKM 8.9), genital fat pad adult (RPKM 8.4) and 27 other tissues See more
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Genomic context

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See Gm14410 in Genome Data Viewer
Location:
2 H4; 2 99.25 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (176882368..176898289, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (177190575..177206497, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene zinc finger protein 120-like Neighboring gene STARR-seq mESC enhancer starr_06664 Neighboring gene predicted gene 14411 Neighboring gene STARR-seq mESC enhancer starr_06665 Neighboring gene STARR-seq mESC enhancer starr_06666 Neighboring gene predicted gene 14413 Neighboring gene STARR-seq mESC enhancer starr_06667 Neighboring gene STARR-seq mESC enhancer starr_06668 Neighboring gene predicted gene 14400 Neighboring gene zinc finger protein 1010

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  2. A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904583, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC100043403
Names
KRAB box and zinc finger, C2H2 type domain containing protein
novel KRAB box and zinc finger, C2H2 type domain containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001374129.1 → NP_001361058.1  uncharacterized protein LOC100043403

    Status: VALIDATED

    Source sequence(s)
    AL845491
    Consensus CDS
    CCDS89602.1
    UniProtKB/TrEMBL
    A2ARW1
    Related
    ENSMUSP00000114668.2, ENSMUST00000133301.9
    Conserved Domains (4) summary
    COG5048
    Location:168 → 362
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:161 → 181
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:3 → 44
    KRAB; KRAB box
    pfam13465
    Location:145 → 170
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    176882368..176898289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001113806.1: Suppressed sequence

    Description
    NM_001113806.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

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