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Ancr-1 AncR-1 non-coding nuclear RNA [ Apis mellifera (honey bee) ]

Gene ID: 100049571, updated on 22-Apr-2023

Summary

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Gene symbol
Ancr-1
Gene description
AncR-1 non-coding nuclear RNA
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
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Genomic context

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See Ancr-1 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
2
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG5 NC_037642.1 (13480118..13487797)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG5 NC_007074.3 (14081050..14088727, complement)

Linkage Group LG5 - NC_037642.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential channel pyrexia Neighboring gene ubiquinone biosynthesis protein COQ6, mitochondrial Neighboring gene uncharacterized LOC102655090 Neighboring gene aarF domain containing kinase 1 Neighboring gene conserved oligomeric Golgi complex subunit 4 Neighboring gene broad-complex core protein Neighboring gene Nedd8 ubiquitin like modifier

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and analysis of the minimal promoter activity of a novel noncoding nuclear RNA gene, AncR-1, from the honeybee (Apis mellifera L.). Sawata M, et al. RNA, 2004 Jul. PMID 15208441, Free PMC Article
  2. lncRNAdb: a reference database for long noncoding RNAs. Amaral PP, et al. Nucleic Acids Res, 2011 Jan. PMID 21112873, Free PMC Article
  3. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  4. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  5. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003566.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AB125322

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037642.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    13480118..13487797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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