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SNORD123 small nucleolar RNA, C/D box 123 [ Homo sapiens (human) ]

Gene ID: 100113384, updated on 10-Dec-2024

Summary

Official Symbol
SNORD123provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 123provided by HGNC
Primary source
HGNC:HGNC:33562
See related
AllianceGenome:HGNC:33562
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See SNORD123 in Genome Data Viewer
Location:
5p15.31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (9548827..9548914)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (9488592..9488679)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (9548939..9549026)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene semaphorin 5A Neighboring gene uncharacterized LOC124901170 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:9196848-9197348 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:9197349-9197849 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr5:9222365-9222985 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15909 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22349 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:9456145-9456684 Neighboring gene SEMA5A antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15910 Neighboring gene uncharacterized LOC101929359 Neighboring gene small nucleolar RNA host gene 18 Neighboring gene uncharacterized LOC124900938 Neighboring gene taste 2 receptor member 1

Genomic regions, transcripts, and products

General gene information

Other Names

  • SNORD123 snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003689.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC034214

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    9548827..9548914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    9488592..9488679
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)