TEX13C TEX13 family member C [Homo sapiens (human)] - Gene

Summary

Official Symbol: TEX13Cprovided by HGNC
Official Full Name: TEX13 family member Cprovided by HGNC
Primary source: HGNC:HGNC:52277
See related: Ensembl:ENSG00000282815 MIM:301123; AllianceGenome:HGNC:52277
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary: Predicted to enable mRNA binding activity. [provided by Alliance of Genome Resources, Jan 2025]
Expression: Restricted expression toward testis (RPKM 1.4) See more
Orthologs: mouse all
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Genomic context

Location:: Xq25

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	X	NC_000023.11 (125319871..125325214)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	X	NC_060947.1 (123631873..123637216)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	X	NC_000023.10 (124453720..124459063)

Chromosome X - NC_000023.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Tissue-specific circular RNA induction during human fetal development
Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
BioProject: PRJNA270632
Publication: PMID 26076956
Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

SHGC-151157 (e-PCR)
- UniSTS:173421

DXS8093 (e-PCR), detects polymorphism
- UniSTS:4734

Gene Ontology Provided by GOA

Function	Evidence Code	Pubs
enables mRNA binding	IBA Inferred from Biological aspect of Ancestor more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: putative testis-expressed protein 13C

Names: testis expressed sequence 13-like; testis-expressed sequence 13C protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001195272.2 → NP_001182201.1 putative testis-expressed protein 13C

See identical proteins and their annotated locations for NP_001182201.1

Status: VALIDATED

Source sequence(s)

AL627231

Consensus CDS

CCDS83488.1

UniProtKB/Swiss-Prot

A0A0J9YWL9

Related

ENSP00000512212.1, ENST00000695840.1

Conserved Domains (3) summary

smart00547
Location:959 → 979

ZnF_RBZ; Zinc finger domain

sd00029
Location:959 → 978

zf-RanBP2; RanBP2-type Zn finger [structural motif]

pfam15186
Location:5 → 148

TEX13; Testis-expressed sequence 13 protein family