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RPS12P31 ribosomal protein S12 pseudogene 31 [ Homo sapiens (human) ]

Gene ID: 100130192, updated on 10-Dec-2024

Summary

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Official Symbol
RPS12P31provided by HGNC
Official Full Name
ribosomal protein S12 pseudogene 31provided by HGNC
Primary source
HGNC:HGNC:35578
See related
Ensembl:ENSG00000242325 AllianceGenome:HGNC:35578
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS12_17_1644
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Genomic context

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See RPS12P31 in Genome Data Viewer
Location:
19q13.11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (32636078..32636475)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (35154837..35155234)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (33126984..33127381)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr19:33071921-33072097 Neighboring gene programmed cell death 5 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr19:33083895-33085094 Neighboring gene ankyrin repeat domain 27 Neighboring gene small nucleolar RNA, H/ACA box 68B Neighboring gene Sharpr-MPRA regulatory region 4203 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:33140365-33140866 Neighboring gene RNA, 7SL, cytoplasmic 789, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10483 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:33166014-33166633 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10485 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14432 Neighboring gene regulator of G protein signaling 9 binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010757.1 

    Range
    101..498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    32636078..32636475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    35154837..35155234
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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