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TNRC6C-AS1 TNRC6C antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100131096, discontinued on 7-May-2020

Summary

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Official Symbol
TNRC6C-AS1provided by HGNC
Official Full Name
TNRC6C antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44360
Gene type
ncRNA
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
lnc; TMC6
Expression
Broad expression in lymph node (RPKM 16.5), spleen (RPKM 13.0) and 23 other tissues See more
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Genomic context

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See TNRC6C-AS1 in Genome Data Viewer
Location:
17q25.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20191205 latest, but not current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (78107401..78111799, complement)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000017.11 Chromosome 17 Reference GRCh38.p13 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh38)

General gene information

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Markers

Clone Names

  • FLJ35597, FLJ37579, FLJ41777, FLJ45799

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    78107401..78111799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_040071.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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