U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TNRC6C-AS1 TNRC6C antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100131096, discontinued on 7-May-2020

Summary

Go to the top of the page Help
Official Symbol
TNRC6C-AS1provided by HGNC
Official Full Name
TNRC6C antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44360
Gene type
ncRNA
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
lnc; TMC6
Expression
Broad expression in lymph node (RPKM 16.5), spleen (RPKM 13.0) and 23 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TNRC6C-AS1 in Genome Data Viewer
Location:
17q25.3
Exon count:
2
Annotation release Status Assembly Chr Location
105 latest, but not current GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (76103482..76107880, complement)
105 latest, but not current HuRef (GCF_000002125.1) 17 AC_000149.1 (71527483..71531881, complement)
105 latest, but not current CHM1_1.1 (GCF_000306695.2) 17 NC_018928.2 (76168127..76172554, complement)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000017.11 Chromosome 17 Reference GRCh38.p13 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Markers

Clone Names

  • FLJ35597, FLJ37579, FLJ41777, FLJ45799

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    78107401..78111799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_040071.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.