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XB5949052.L high choriolytic enzyme 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100137635, updated on 4-Jan-2025

Summary

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Symbol
XB5949052.L
Full Name
high choriolytic enzyme 2 L homeolog
Primary source
Xenbase:XB-GENE-5949555
Locus tag
XELAEV_18045501mg
See related
EnsemblRapid:ENSXLAG00005020053 AllianceGenome:Xenbase:XB-GENE-5949555
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
LOC100489456.L
Summary
Predicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to act upstream of or within proteolysis. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See XB5949052.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (118868275..118885560)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (108269140..108286649)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene nth-like DNA glycosylase 1 L homeolog Neighboring gene NHERF family PDZ scaffold protein 2 L homeolog Neighboring gene neuropeptide W L homeolog Neighboring gene zinc finger protein 598 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within proteolysis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Embryonic protein UVS.2-like; uncharacterized protein LOC100137635

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001114785.1 → NP_001108257.1  Embryonic protein UVS.2-like precursor

    See identical proteins and their annotated locations for NP_001108257.1

    Status: PROVISIONAL

    Source sequence(s)
    BC157431
    UniProtKB/TrEMBL
    A0A974H4A0, A9ULX0
    Related
    ENSXLAP00005058697.1, ENSXLAT00005060135.1
    Conserved Domains (3) summary
    pfam00431
    Location:348 → 456
    CUB; CUB domain
    pfam01400
    Location:87 → 276
    Astacin; Astacin (Peptidase family M12A)
    cl00064
    Location:93 → 276
    ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    118868275..118885560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041575430.1 → XP_041431364.1  uncharacterized protein LOC100137635 isoform X1

    UniProtKB/TrEMBL
    A0A8J1LQ48, A0A974H4A0
    Related
    ENSXLAP00005058706.1, ENSXLAT00005060145.1
    Conserved Domains (2) summary
    cd00041
    Location:348 → 458
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cl00064
    Location:93 → 276
    ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
Nucleotide Protein Strain
Heading Accession and Version

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