U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

znf710b zinc finger protein 710b [ Danio rerio (zebrafish) ]

Gene ID: 100149283, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
znf710bprovided by ZNC
Official Full Name
zinc finger protein 710bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-120503-2
See related
Ensembl:ENSDARG00000005549 AllianceGenome:ZFIN:ZDB-GENE-120503-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human ZNF710 (zinc finger protein 710). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See znf710b in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (30209911..30227904, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (29938761..29956813, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene microRNA 184-2 Neighboring gene WD repeat domain 76 Neighboring gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Bb Neighboring gene harbinger transposase derived 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Lo J, et al. Genome Res, 2003 Mar. PMID 12618376, Free PMC Article
  2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein 710

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    30209911..30227904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021477855.2 → XP_021333530.1  zinc finger protein 710 isoform X2

    UniProtKB/TrEMBL
    A0A8M2BG69, F1R7B1
    Related
    ENSDARP00000142708.1, ENSDART00000173514.2
    Conserved Domains (4) summary
    COG5048
    Location:308 → 545
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:299 → 319
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:546 → 570
    zf-H2C2_2; Zinc-finger double domain
    pfam15440
    Location:84 → 252
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  2. XM_021477854.2 → XP_021333529.1  zinc finger protein 710 isoform X1

    UniProtKB/TrEMBL
    A0A1D5NSP0, A0A8M1QVA2
    Related
    ENSDARP00000142857.1, ENSDART00000173646.2
    Conserved Domains (4) summary
    COG5048
    Location:337 → 574
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:328 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:575 → 599
    zf-H2C2_2; Zinc-finger double domain
    pfam15440
    Location:113 → 281
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394696.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    178272..193449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005168921.5 → XP_005168978.1  zinc finger protein 710 isoform X2

    UniProtKB/TrEMBL
    A0A8M2BG69, F1R7B1
    Conserved Domains (4) summary
    COG5048
    Location:308 → 545
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:299 → 319
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:546 → 570
    zf-H2C2_2; Zinc-finger double domain
    pfam15440
    Location:84 → 252
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  2. XM_001922684.8 → XP_001922719.3  zinc finger protein 710 isoform X1

    UniProtKB/TrEMBL
    A0A1D5NSP0, A0A8M1QVA2
    Conserved Domains (4) summary
    COG5048
    Location:337 → 574
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:328 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:575 → 599
    zf-H2C2_2; Zinc-finger double domain
    pfam15440
    Location:113 → 281
    THRAP3_BCLAF1; THRAP3/BCLAF1 family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.