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TRE-TTC2-1 tRNA-Glu (anticodon TTC) 2-1 [ Homo sapiens (human) ]

Gene ID: 100189030, updated on 10-Dec-2024

Summary

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Official Symbol
TRE-TTC2-1provided by HGNC
Official Full Name
tRNA-Glu (anticodon TTC) 2-1provided by HGNC
Primary source
HGNC:HGNC:34589
See related
AllianceGenome:HGNC:34589
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAE7
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Genomic context

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See TRE-TTC2-1 in Genome Data Viewer
Location:
13q14.12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (44917927..44917998, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (44137989..44138060, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (45492062..45492133, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:45373665-45374164 Neighboring gene long intergenic non-protein coding RNA 330 Neighboring gene uncharacterized LOC105370187 Neighboring gene uncharacterized LOC107984619 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7675 Neighboring gene nuclear FMR1 interacting protein 1 Neighboring gene Sharpr-MPRA regulatory region 6953 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:45563144-45563782 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:45563783-45564419 Neighboring gene GPALPP motifs containing 1 Neighboring gene RNA, 7SL, cytoplasmic 49, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Glu (TTC) 2-1
  • transfer RNA glutamic acid 7 (anticodon UUC)
  • transfer RNA-Glu (TTC) 2-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    44917927..44917998 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    44137989..44138060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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