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TRN-GTT2-3 tRNA-Asn (anticodon GTT) 2-3 [ Homo sapiens (human) ]

Gene ID: 100189083, updated on 17-Sep-2024

Summary

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Official Symbol
TRN-GTT2-3provided by HGNC
Official Full Name
tRNA-Asn (anticodon GTT) 2-3provided by HGNC
Primary source
HGNC:HGNC:34643
See related
AllianceGenome:HGNC:34643
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAN11
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Genomic context

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See TRN-GTT2-3 in Genome Data Viewer
Location:
10p12.31
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (22229509..22229582, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (22248568..22248641, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (22518438..22518511, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene endogenous Bornavirus like nucleoprotein 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2201 Neighboring gene proteasome activator subunit 2 pseudogene 6 Neighboring gene uncharacterized LOC124902391 Neighboring gene uncharacterized LOC105376447 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3128 Neighboring gene uncharacterized LOC100130992 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2202 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2203 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:22542487-22543183

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Asn (GTT) 2-3
  • transfer RNA asparagine 11 (anticodon GUU)
  • transfer RNA-Asn (GTT) 2-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    22229509..22229582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    22248568..22248641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials