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LOC100252764 protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic [ Vitis vinifera (wine grape) ]

Gene ID: 100252764, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100252764
Gene description
protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic
Locus tag
VIT_00030099001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100252764 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 12 NC_081816.1 (9579409..9587124)
102 previous assembly 12X (GCF_000003745.3) 12 NC_012018.3 (9804238..9811886)

Chromosome 12 - NC_081816.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104880928 Neighboring gene disease resistance protein RPM1 Neighboring gene protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic Neighboring gene pentatricopeptide repeat-containing protein At5g61990, mitochondrial Neighboring gene uncharacterized LOC132254721

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in membrane lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of response to reactive oxygen species IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081816.1 Reference ASM3070453v1 Primary Assembly

    Range
    9579409..9587124
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002268092.5 → XP_002268128.2  protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic

    UniProtKB/TrEMBL
    A5C497
    Conserved Domains (2) summary
    COG0661
    Location:147 → 667
    AarF; Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport and metabolism, Signal transduction mechanisms]
    cd05121
    Location:238 → 485
    ABC1_ADCK3-like; Activator of bc1 complex (ABC1) kinases (also called aarF domain containing kinase 3) and similar proteins
Nucleotide Protein
Heading Accession and Version

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