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LOC100266580 bet1-like SNARE 1-1 [ Vitis vinifera (wine grape) ]

Gene ID: 100266580, updated on 29-Sep-2023

Summary

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Gene symbol
LOC100266580
Gene description
bet1-like SNARE 1-1
Locus tag
VIT_00029089001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100266580 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 5 NC_081809.1 (12859130..12868596)
102 previous assembly 12X (GCF_000003745.3) 5 NC_012011.3 (12315767..12325208)

Chromosome 5 - NC_081809.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100266687 Neighboring gene probable DNA primase large subunit Neighboring gene small nucleolar RNA R71 Neighboring gene gibberellin-regulated protein 14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
  2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
bet1-like SNARE 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081809.1 Reference ASM3070453v1 Primary Assembly

    Range
    12859130..12868596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002285644.4 → XP_002285680.1  bet1-like SNARE 1-1

    See identical proteins and their annotated locations for XP_002285680.1

    UniProtKB/TrEMBL
    D7TSA1
    Conserved Domains (1) summary
    cd15853
    Location:35 → 92
    SNARE_Bet1; SNARE motif of Bet1

  2. XM_010651937.3 → XP_010650239.1  bet1-like SNARE 1-1

    See identical proteins and their annotated locations for XP_010650239.1

    UniProtKB/TrEMBL
    D7TSA1
    Conserved Domains (1) summary
    cd15853
    Location:35 → 92
    SNARE_Bet1; SNARE motif of Bet1
Nucleotide Protein
Heading Accession and Version

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