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LOC100267942 ribulose bisphosphate carboxylase small chain, chloroplastic-like [ Vitis vinifera (wine grape) ]

Gene ID: 100267942, updated on 29-Sep-2023

Summary

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Gene symbol
LOC100267942
Gene description
ribulose bisphosphate carboxylase small chain, chloroplastic-like
Locus tag
VIT_00008288001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100267942 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 17 NC_081821.1 (4041276..4042546, complement)
102 previous assembly 12X (GCF_000003745.3) 17 NC_012023.3 (3623300..3624476, complement)

Chromosome 17 - NC_081821.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100249284 Neighboring gene uncharacterized LOC100262793 Neighboring gene kinesin-like protein KIN-14P Neighboring gene uncharacterized LOC100259501

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. Velasco R, et al. PLoS One, 2007 Dec 19. PMID 18094749, Free PMC Article
  2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribulose bisphosphate carboxylase small subunit, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081821.1 Reference ASM3070453v1 Primary Assembly

    Range
    4041276..4042546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002276931.5 → XP_002276967.1  ribulose bisphosphate carboxylase small subunit, chloroplastic

    See identical proteins and their annotated locations for XP_002276967.1

    UniProtKB/TrEMBL
    A0A438JZ20, A5C718
    Conserved Domains (3) summary
    PLN02289
    Location:1 → 180
    PLN02289; ribulose-bisphosphate carboxylase small chain
    pfam00101
    Location:71 → 179
    RuBisCO_small; Ribulose bisphosphate carboxylase, small chain
    pfam12338
    Location:2 → 46
    RbcS; Ribulose-1,5-bisphosphate carboxylase small subunit
Nucleotide Protein
Heading Accession and Version

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