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LOC100288010 cytochrome c oxidase subunit 7A2 like pseudogene [ Homo sapiens (human) ]

Gene ID: 100288010, updated on 10-Dec-2024

Summary

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Gene symbol
LOC100288010
Gene description
cytochrome c oxidase subunit 7A2 like pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100288010 in Genome Data Viewer
Location:
5q33.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (154994172..154994441)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (155528063..155528332)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (154373732..154374001)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene gem nuclear organelle associated protein 5 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr5:154287897-154288396 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:154317267-154317858 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23490 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23491 Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene Sharpr-MPRA regulatory region 11709 Neighboring gene kinesin family member 4B Neighboring gene NANOG hESC enhancer GRCh37_chr5:154428817-154429318 Neighboring gene ribosomal protein L6 pseudogene 32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030083.1 

    Range
    101..370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    154994172..154994441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    155528063..155528332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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