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LOC100288628 SUMO specific peptidase 6 pseudogene [ Homo sapiens (human) ]

Gene ID: 100288628, updated on 10-Dec-2024

Summary

Gene symbol
LOC100288628
Gene description
SUMO specific peptidase 6 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LOC100288628 in Genome Data Viewer
Location:
6p11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (58071691..58072722, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (57910449..57911480, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (58397969..58399000, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927293 Neighboring gene uncharacterized LOC124901336 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene 15 Neighboring gene RBBP4 pseudogene 4 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:58773583-58774340 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58778115-58778671 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58779228-58779784 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58778672-58779227 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58777559-58778114 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58777003-58777558 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58776447-58777002 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58775889-58776446 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:58774341-58775097 Neighboring gene NANOG hESC enhancer GRCh37_chr6:57337645-57338146 Neighboring gene NANOG hESC enhancer GRCh37_chr6:57339131-57339632 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:57354999-57355730 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:57356203-57356811 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:57356812-57357419 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:57380456-57381014 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:57383839-57384752 Neighboring gene Sharpr-MPRA regulatory region 9523 Neighboring gene primase 2B, pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022303.2 

    Range
    100..1131
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    58071691..58072722 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    57910449..57911480 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)