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LOC100288683 ribosomal protein L21 pseudogene [ Homo sapiens (human) ]

Gene ID: 100288683, updated on 10-Dec-2024

Summary

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Gene symbol
LOC100288683
Gene description
ribosomal protein L21 pseudogene
See related
Ensembl:ENSG00000249148
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100288683 in Genome Data Viewer
Location:
4p15.33
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (13631785..13632641, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (13611490..13612346, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (13633409..13634265, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:13600786-13601286 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:13601287-13601787 Neighboring gene biorientation of chromosomes in cell division 1 like 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21326 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15289 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:13628778-13629508 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:13629509-13630239 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:13641327-13641828 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:13641829-13642328 Neighboring gene microRNA 5091 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21328 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:13666052-13666590 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:13666591-13667128 Neighboring gene ribosomal protein L32 pseudogene 12 Neighboring gene long intergenic non-protein coding RNA 1182 Neighboring gene uncharacterized LOC101929048 Neighboring gene uncharacterized LOC107986182

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022005.1 

    Range
    101..957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    13631785..13632641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    13611490..13612346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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