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Gm10509 predicted gene 10509 [ Mus musculus (house mouse) ]

Gene ID: 100310809, updated on 27-Nov-2024

Summary

Official Symbol
Gm10509provided by MGI
Official Full Name
predicted gene 10509provided by MGI
Primary source
MGI:MGI:3796835
See related
Ensembl:ENSMUSG00000073448 AllianceGenome:MGI:3796835
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

See Gm10509 in Genome Data Viewer
Location:
17 A3.3; 17 11.4 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (21898792..21911448)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (21679877..21692542)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30531 Neighboring gene predicted gene, 41541 Neighboring gene zinc finger protein 983 Neighboring gene predicted gene, 53991 Neighboring gene STARR-positive B cell enhancer ABC_E1933 Neighboring gene zinc finger protein 760 Neighboring gene STARR-seq mESC enhancer starr_42015 Neighboring gene zinc finger protein 229

Genomic regions, transcripts, and products

General protein information

Preferred Names
uncharacterized protein LOC100310809
Names
zinc finger protein 51 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001354753.1NP_001341682.1  uncharacterized protein LOC100310809

    Status: VALIDATED

    Source sequence(s)
    MF597758
    UniProtKB/TrEMBL
    A0A9L6KDU7
    Related
    ENSMUSP00000159640.1, ENSMUST00000249261.1
    Conserved Domains (5) summary
    COG5048
    Location:170588
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:629712
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:635655
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:1252
    KRAB; KRAB box
    pfam13465
    Location:619644
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    21898792..21911448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)