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MIR548H2 microRNA 548h-2 [ Homo sapiens (human) ]

Gene ID: 100313773, updated on 10-Dec-2024

Summary

Official Symbol
MIR548H2provided by HGNC
Official Full Name
microRNA 548h-2provided by HGNC
Primary source
HGNC:HGNC:35343
See related
Ensembl:ENSG00000221801 miRBase:MI0006412; AllianceGenome:HGNC:35343
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIR548H-2; MIRN548H2
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Annotation information
Note: MIR548H2 (GeneID 100313773) is not annotated in NCBI's Build 37.3. Its correct location is chr16: 11400297-11400384 (-). [17 Jun 2014]
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Genomic context

See MIR548H2 in Genome Data Viewer
Location:
16p13.13
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (11306440..11306527, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (11342652..11342739, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (11400297..11400384, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371082 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:11379964-11380464 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:11380465-11380965 Neighboring gene small nucleolar RNA U13 Neighboring gene protamine 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10430 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11391651-11392334 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10431 Neighboring gene Sharpr-MPRA regulatory region 10157 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10432 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11408487-11409184 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11409185-11409882 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11409883-11410580 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11414774-11415369 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10433 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10434 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10435 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10436 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10437 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:11422541-11423320 Neighboring gene uncharacterized LOC105371083 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7202 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7203 Neighboring gene RecQ mediated genome instability 2

Genomic regions, transcripts, and products

General gene information

Other Names

  • hsa-mir-548h-2

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_031678.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC009121
    Related
    ENST00000408874.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    11306440..11306527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    11342652..11342739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)