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RANBP17 RAN binding protein 17 [ Bos taurus (domestic cattle) ]

Gene ID: 100337114, updated on 29-Jan-2025

Summary

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Official Symbol
RANBP17provided by VGNC
Official Full Name
RAN binding protein 17provided by VGNC
Primary source
VGNC:VGNC:57359
See related
BGD:BT26048; Ensembl:ENSBTAG00000024801
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See RANBP17 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 20 NC_037347.1 (2765585..3149472)

Chromosome 20 - NC_037347.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel interacting protein 1 Neighboring gene uncharacterized LOC101904552 Neighboring gene gamma-aminobutyric acid type A receptor subunit pi Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene T cell leukemia homeobox 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ran-binding protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    2765585..3149472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059878829.1 → XP_059734812.1  ran-binding protein 17 isoform X1

    UniProtKB/TrEMBL
    F1MT40

  2. XM_059878830.1 → XP_059734813.1  ran-binding protein 17 isoform X2

    UniProtKB/TrEMBL
    A0AAA9TRY3, F1MT40
    Related
    ENSBTAP00070024132.1, ENSBTAT00070040622.1

  3. XM_024981423.2 → XP_024837191.1  ran-binding protein 17 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1LRN8, F1MT40
    Related
    ENSBTAP00070024124.1, ENSBTAT00070040611.1
    Conserved Domains (2) summary
    smart00913
    Location:30 → 95
    IBN_N; Importin-beta N-terminal domain
    cl26694
    Location:8 → 167
    Xpo1; Exportin 1-like protein

  4. XM_059878831.1 → XP_059734814.1  ran-binding protein 17 isoform X4

    UniProtKB/TrEMBL
    F1MT40

  5. XM_059878832.1 → XP_059734815.1  ran-binding protein 17 isoform X5

    UniProtKB/TrEMBL
    F1MT40

RNA

  1. XR_009491905.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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