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Smim10l1 small integral membrane protein 10 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100360120, updated on 2-Nov-2024

Summary

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Symbol
Smim10l1provided by RGD
Full Name
small integral membrane protein 10 like 1provided by RGD
Primary source
RGD:2322729
See related
AllianceGenome:RGD:2322729
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Smim10l1b
Summary
Predicted to be located in mitochondrion. Orthologous to human SMIM10L1 (small integral membrane protein 10 like 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See Smim10l1 in Genome Data Viewer
Location:
4q42
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (168073100..168076291)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (166341699..166345530)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (167218998..167222864)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene taste receptor, type 2, member 103 Neighboring gene large ribosomal subunit protein uL1-like Neighboring gene taste receptor, type 2, member 140 Neighboring gene uncharacterized LOC108350777 Neighboring gene SMR2 protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context. Morgenstern M, et al. Cell Metab, 2021 Dec 7. PMID 34800366, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: small integral membrane protein 10-like protein 1
Names
small integral membrane protein 10-like 1B
small integral membrane protein 10-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    168073100..168076291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017593058.3 → XP_017448547.1  LOW QUALITY PROTEIN: small integral membrane protein 10-like protein 1

    Conserved Domains (1) summary
    pfam15118
    Location:4 → 64
    DUF4560; Domain of unknown function (DUF4560)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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