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LOC100361261 uncharacterized LOC100361261 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100361261, updated on 4-Jan-2025

Summary

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Symbol
LOC100361261provided by RGD
Full Name
uncharacterized LOC100361261provided by RGD
Primary source
RGD:124713617
See related
EnsemblRapid:ENSRNOG00000084027 AllianceGenome:RGD:124713617
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be involved in proteolysis. [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Lung (RPKM 46.8), Spleen (RPKM 42.5) and 5 other tissues See more
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Genomic context

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See LOC100361261 in Genome Data Viewer
Location:
15p12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (34143792..34146728, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (30173597..30176533, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (36111884..36114917, complement)

Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene granzyme C, pseudogene 1 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene granzyme C-like Neighboring gene small nucleolar RNA SNORA17 Neighboring gene granzyme-like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Cloning of cDNA for granzyme-like protein III, a novel serine proteinase from rat duodenum. Grigorenko VG, et al. FEBS Lett, 1994 Apr 11. PMID 8150084
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_149639.1 

    Range
    101..3037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086033.1 Reference GRCr8

    Range
    34143792..34146728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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