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LOC100362418 killer cell lectin-like receptor subfamily B member 1C [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362418, updated on 17-Aug-2024

Summary

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Symbol
LOC100362418provided by RGD
Full Name
killer cell lectin-like receptor subfamily B member 1Cprovided by RGD
Primary source
RGD:2318170
See related
AllianceGenome:RGD:2318170
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Thymus (RPKM 92.0), Spleen (RPKM 41.6) and 6 other tissues See more
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Genomic context

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See LOC100362418 in Genome Data Viewer
Location:
4q42
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (164251108..164267200)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (162565111..162569981)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (162880504..162885852)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 13C-like Neighboring gene C-type lectin domain family 2, member E Neighboring gene U7 small nuclear RNA Neighboring gene Rhox homeobox family member 5, pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    164251108..164267200
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    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005503987.2 RNA Sequence

  2. XR_005503988.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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