LOC100364335 cold shock domain-containing protein E1-like [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: LOC100364335provided by RGD
Full Name: cold shock domain-containing protein E1-likeprovided by RGD
Primary source: RGD:2321223
See related: EnsemblRapid:ENSRNOG00000072708 AllianceGenome:RGD:2321223
Gene type: pseudo
RefSeq status: INFERRED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to enable RNA binding activity. Predicted to be involved in stress granule assembly. Predicted to be located in P-body and cytoplasmic stress granule. Orthologous to human CSDE1 (cold shock domain containing E1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 19

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	19	NC_086037.1 (29652535..29656308)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	13	NC_051348.1 (78477560..78481251)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	19	NC_005118.4 (28220255..28223601)

Chromosome 19 - NC_086037.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in stress granule assembly	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in P-body	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoplasmic stress granule	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cold shock domain-containing protein E1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.