U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Tubb2al1 tubulin, beta 2A class IIa like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100364958, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
Tubb2al1provided by RGD
Official Full Name
tubulin, beta 2A class IIa like 1provided by RGD
Primary source
RGD:2320008
See related
AllianceGenome:RGD:2320008
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Brain (RPKM 606.6), Liver (RPKM 168.0) and 7 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Tubb2al1 in Genome Data Viewer
Location:
17p12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (30991070..31001396)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (30785740..30791208)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (31482197..31482925)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102551220 Neighboring gene tubulin, beta 2B class IIb Neighboring gene tubulin, beta 2A class IIa Neighboring gene biphenyl hydrolase like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
tubulin beta-4B chain-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    30991070..31001396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006253861.5 → XP_006253923.1  tubulin beta-4B chain-like isoform X1

    See identical proteins and their annotated locations for XP_006253923.1

    Conserved Domains (1) summary
    cl10017
    Location:7 → 84
    Tubulin_FtsZ_Cetz-like; Tubulin protein family of FtsZ and CetZ-like

  2. XM_039096193.2 → XP_038952121.1  tubulin beta-4B chain-like isoform X2

    Conserved Domains (1) summary
    PLN00220
    Location:7 → 81
    PLN00220; tubulin beta chain; Provisional

  3. XM_039096194.2 → XP_038952122.1  tubulin beta-4B chain-like isoform X3

    Conserved Domains (1) summary
    PLN00220
    Location:7 → 80
    PLN00220; tubulin beta chain; Provisional

  4. XM_039096195.2 → XP_038952123.1  tubulin beta-4B chain-like isoform X4

    Conserved Domains (1) summary
    PLN00220
    Location:7 → 80
    PLN00220; tubulin beta chain; Provisional
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials