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LOC100365995 rCG28262-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100365995, discontinued on 6-Mar-2021

Summary

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Symbol
LOC100365995provided by RGD
Full Name
rCG28262-likeprovided by RGD
Primary source
RGD:2317994
Gene type
protein coding
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Spleen (RPKM 1020.6) and Liver (RPKM 375.6) See more
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Genomic context

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See LOC100365995 in Genome Data Viewer
Location:
4q23
Exon count:
4
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (70551447..70563005, complement)
106 latest, but not current Rn_Celera (GCF_000002265.2) 4 AC_000072.1 (65183478..65185744, complement)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
rCG28262-like
anionic trypsin-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005103.4 Reference Rnor_6.0 Primary Assembly

    Range
    70551447..70563005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017593079.1 → XP_017448568.1  

Alternate Rn_Celera

Genomic

  1. AC_000072.1 Alternate Rn_Celera

    Range
    65183478..65185744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017602720.1 → XP_017458209.1  

Gene LinkOut

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