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KRT8P42 keratin 8 pseudogene 42 [ Homo sapiens (human) ]

Gene ID: 100418750, updated on 17-Sep-2024

Summary

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Official Symbol
KRT8P42provided by HGNC
Official Full Name
keratin 8 pseudogene 42provided by HGNC
Primary source
HGNC:HGNC:39876
See related
AllianceGenome:HGNC:39876
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See KRT8P42 in Genome Data Viewer
Location:
6q23.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (134296744..134298781, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (135484875..135486912, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (134617882..134619919, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene serum/glucocorticoid regulated kinase 1 Neighboring gene ribosomal protein S29 pseudogene 32 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25082 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25083 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25084 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25085 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25086 Neighboring gene RNA, 5S ribosomal pseudogene 218 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25088 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25087 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:134617783-134618284 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:134632359-134632918 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25089 Neighboring gene uncharacterized LOC105378009 Neighboring gene SGK1-CHCHD2P4 intergenic CAGE-defined mid-level expression enhancer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17559 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025872.2 

    Range
    101..2138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    134296744..134298781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    135484875..135486912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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