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CPSF1P2 CPSF1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100422285, updated on 10-Dec-2024

Summary

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Official Symbol
CPSF1P2provided by HGNC
Official Full Name
CPSF1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:54959
See related
Ensembl:ENSG00000220132 AllianceGenome:HGNC:54959
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See CPSF1P2 in Genome Data Viewer
Location:
Xp11.23
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (49911589..49912381, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (49227526..49228318, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (49676196..49676988, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20846 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20847 Neighboring gene USP27X divergent transcript Neighboring gene ubiquitin specific peptidase 27 X-linked Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20848 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20849 Neighboring gene chloride voltage-gated channel 5 Neighboring gene RNA, U6 small nuclear 421, pseudogene Neighboring gene microRNA 532

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • cleavage and polyadenylation specific factor 1, 160kDa pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026701.2 

    Range
    101..893
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    49911589..49912381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    49227526..49228318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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