U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCAMP1 secretory carrier membrane protein 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 100424165, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SCAMP1provided by VGNC
Official Full Name
secretory carrier membrane protein 1provided by VGNC
Primary source
VGNC:VGNC:84489
Locus tag
EGK_16622
See related
Ensembl:ENSMMUG00000039925
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SCAMP1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (75214516..75338983)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (75104588..75225791)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106998817 Neighboring gene LHFPL tetraspan subfamily member 2 Neighboring gene 40S ribosomal protein S3a-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in recycling endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
secretory carrier-associated membrane protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    75214516..75338983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002804439.3 → XP_002804485.2  secretory carrier-associated membrane protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QVL0, A0A663DGA8, A0A8J8XWV4, G7MUU1
    Related
    ENSMMUP00000052090.2, ENSMMUT00000074616.2
    Conserved Domains (1) summary
    pfam04144
    Location:117 → 292
    SCAMP; SCAMP family

  2. XM_028849540.1 → XP_028705373.1  secretory carrier-associated membrane protein 1 isoform X3

    UniProtKB/TrEMBL
    F7G220
    Related
    ENSMMUP00000021533.3, ENSMMUT00000023022.4
    Conserved Domains (1) summary
    pfam04144
    Location:117 → 258
    SCAMP; SCAMP family

  3. XM_015140319.2 → XP_014995805.1  secretory carrier-associated membrane protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A5F8ACI0
    Conserved Domains (1) summary
    pfam04144
    Location:91 → 266
    SCAMP; SCAMP family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.