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Gm17509 predicted gene, 17509 [ Mus musculus (house mouse) ]

Gene ID: 100502739, updated on 17-Aug-2024

Summary

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Official Symbol
Gm17509provided by MGI
Official Full Name
predicted gene, 17509provided by MGI
Primary source
MGI:MGI:4937143
See related
Ensembl:ENSMUSG00000091423 AllianceGenome:MGI:4937143
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Gm17509 in Genome Data Viewer
Location:
13 65.4 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (117355230..117357637, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene 6416 Neighboring gene elongation protein 4 homolog pseudogene Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:118004988-118005274 Neighboring gene STARR-seq mESC enhancer starr_35777 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:118009934-118010043 Neighboring gene ring finger protein 7 pseudogene Neighboring gene embigin Neighboring gene STARR-seq mESC enhancer starr_35778 Neighboring gene H3 histone, family 3A pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000079.7 Chromosome 13 Reference GRCm39 C57BL/6J

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_188751.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC123935
    Related
    ENSMUST00000165680.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    117355230..117357637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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