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4921513H07Rik RIKEN cDNA 4921513H07 gene [ Mus musculus (house mouse) ]

Gene ID: 100504457, updated on 26-Nov-2024

Summary

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Official Symbol
4921513H07Rikprovided by MGI
Official Full Name
RIKEN cDNA 4921513H07 geneprovided by MGI
Primary source
MGI:MGI:1918106
See related
Ensembl:ENSMUSG00000128969 AllianceGenome:MGI:1918106
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm42740
Expression
Restricted expression toward testis adult (RPKM 56.5) See more
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Genomic context

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See 4921513H07Rik in Genome Data Viewer
Location:
6; 6 F3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (127753046..127755628, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (127776083..127778665, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2210 Neighboring gene calcium release activated channel regulator 2A Neighboring gene STARR-positive B cell enhancer ABC_E9677 Neighboring gene protein arginine N-methyltransferase 8 Neighboring gene predicted gene, 38900 Neighboring gene STARR-seq mESC enhancer starr_17419 Neighboring gene STARR-seq mESC enhancer starr_17420 Neighboring gene predicted gene, 40402 Neighboring gene microRNA 7233 Neighboring gene predicted gene, 38901 Neighboring gene STARR-seq mESC enhancer starr_17422 Neighboring gene STARR-seq mESC enhancer starr_17423 Neighboring gene predicted gene, 46976

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Expression profiling reveals developmentally regulated lncRNA repertoire in the mouse male germline. Bao J, et al. Biol Reprod, 2013 Nov. PMID 24048575, Free PMC Article
  2. Long noncoding RNAs expression profile of the developing mouse heart. Zhu JG, et al. J Cell Biochem, 2014 May. PMID 24375461
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_153846.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC049716
    Related
    ENSMUST00000290967.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    127753046..127755628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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