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LOC100505909 histidine-rich glycoprotein [ Homo sapiens (human) ]

Gene ID: 100505909, updated on 17-Sep-2024

Summary

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Gene symbol
LOC100505909
Gene description
histidine-rich glycoprotein
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC100505909 in Genome Data Viewer
Location:
17q25.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (83218400..83227851, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929650 Neighboring gene uncharacterized LOC124904105 Neighboring gene uncharacterized LOC105371948 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9233 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81162966-81163480 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81163481-81163995 Neighboring gene ribosomal protein L23a pseudogene 87

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Lineage-specific gene duplication and loss in human and great ape evolution. Fortna A, et al. PLoS Biol, 2004 Jul. PMID 15252450, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

General gene information

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Clone Names

  • AC139099.5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    83218400..83227851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_933966.3 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791804.1 Reference GRCh38.p14 PATCHES

    Range
    115648..125099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007069572.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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