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KYAT1 kynurenine aminotransferase 1 [ Sus scrofa (pig) ]

Gene ID: 100515071, updated on 3-Dec-2024

Summary

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Official Symbol
KYAT1provided by VGNC
Official Full Name
kynurenine aminotransferase 1provided by VGNC
Primary source
VGNC:VGNC:103115
See related
Ensembl:ENSSSCG00000005663
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 9.4), liver (RPKM 6.6) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See KYAT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (269172628..269209553, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 1 NC_010443.4 (303188686..303225635, complement)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 13 Neighboring gene endonuclease G Neighboring gene SPOUT domain containing methyltransferase 1 Neighboring gene leucine rich repeat containing 8 VRAC subunit A Neighboring gene phytanoyl-CoA dioxygenase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables kynurenine-oxoglutarate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kynurenine--oxoglutarate transaminase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    269172628..269209553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021069820.1 → XP_020925479.1  kynurenine--oxoglutarate transaminase 1 isoform X6

    UniProtKB/TrEMBL
    A0A287B5W3, A0A4X1TJY5
    Related
    ENSSSCP00000051847.3, ENSSSCT00000057949.3
    Conserved Domains (1) summary
    cl27741
    Location:24 → 422
    Aminotran_1_2; Aminotransferase class I and II

  2. XM_013993919.2 → XP_013849373.1  kynurenine--oxoglutarate transaminase 1 isoform X5

    UniProtKB/TrEMBL
    A0A8D1M937
    Conserved Domains (2) summary
    cd00609
    Location:31 → 445
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PRK08912
    Location:24 → 450
    PRK08912; hypothetical protein; Provisional

  3. XM_003122209.6 → XP_003122257.1  kynurenine--oxoglutarate transaminase 1 isoform X4

    UniProtKB/TrEMBL
    A0A5G2QJ54, A0A8D1MAK1, A0A8D1RI63
    Related
    ENSSSCP00000062054.1, ENSSSCT00000090159.1
    Conserved Domains (2) summary
    cd00609
    Location:65 → 451
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PRK08912
    Location:58 → 456
    PRK08912; hypothetical protein; Provisional

  4. XM_013993916.2 → XP_013849370.1  kynurenine--oxoglutarate transaminase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8D1M937, A0A8D1RP60
    Related
    ENSSSCP00000079310.1, ENSSSCT00000102504.1
    Conserved Domains (2) summary
    cd00609
    Location:65 → 479
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PRK08912
    Location:58 → 484
    PRK08912; hypothetical protein; Provisional

  5. XM_013993917.2 → XP_013849371.1  kynurenine--oxoglutarate transaminase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8D1M937, A0A8D1RP60
    Conserved Domains (2) summary
    cd00609
    Location:65 → 479
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PRK08912
    Location:58 → 484
    PRK08912; hypothetical protein; Provisional

  6. XM_013993920.2 → XP_013849374.1  kynurenine--oxoglutarate transaminase 1 isoform X5

    UniProtKB/TrEMBL
    A0A8D1M937
    Conserved Domains (2) summary
    cd00609
    Location:31 → 445
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PRK08912
    Location:24 → 450
    PRK08912; hypothetical protein; Provisional

  7. XM_003480618.4 → XP_003480666.1  kynurenine--oxoglutarate transaminase 1 isoform X4

    UniProtKB/TrEMBL
    A0A5G2QJ54, A0A8D1MAK1, A0A8D1RI63
    Conserved Domains (2) summary
    cd00609
    Location:65 → 451
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PRK08912
    Location:58 → 456
    PRK08912; hypothetical protein; Provisional

  8. XM_005660504.3 → XP_005660561.1  kynurenine--oxoglutarate transaminase 1 isoform X6

    UniProtKB/TrEMBL
    A0A287B5W3, A0A4X1TJY5
    Conserved Domains (1) summary
    cl27741
    Location:24 → 422
    Aminotran_1_2; Aminotransferase class I and II

  9. XM_013993915.2 → XP_013849369.1  kynurenine--oxoglutarate transaminase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8D1FNG4, A0A8D1U832, A0A8D2C880, A0A8W4FI12
    Related
    ENSSSCP00000077953.1, ENSSSCT00000098974.1
    Conserved Domains (2) summary
    cd00609
    Location:66 → 480
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PRK08912
    Location:59 → 485
    PRK08912; hypothetical protein; Provisional

  10. XM_005660500.3 → XP_005660557.1  kynurenine--oxoglutarate transaminase 1 isoform X3

    UniProtKB/TrEMBL
    A0A8D0R565, A0A8D0XBD8, A0A8D1T4Q0
    Conserved Domains (2) summary
    cd00609
    Location:66 → 452
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PRK08912
    Location:59 → 457
    PRK08912; hypothetical protein; Provisional

RNA

  1. XR_002337758.1 RNA Sequence

  2. XR_002337757.1 RNA Sequence

Nucleotide Protein
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