U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100533328 PKG [ Aplysia californica (California sea hare) ]

Gene ID: 100533328, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100533328
Gene description
PKG
See related
EnsemblRapid:LOC100533328
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aplysia californica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Tectipleura; Aplysiida; Aplysioidea; Aplysiidae; Aplysia
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100533328 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current AplCal3.0 (GCF_000002075.1) Unplaced Scaffold NW_004797452.1 (229473..413460)

NW_004797452.1Genomic Context describing neighboring genes Neighboring gene THO complex subunit 4 Neighboring gene regulator of G-protein signaling 7

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004797452 Unplaced Scaffold Reference AplCal3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A neuronal isoform of protein kinase G couples mitogen-activated protein kinase nuclear import to axotomy-induced long-term hyperexcitability in Aplysia sensory neurons. Sung YJ, et al. J Neurosci, 2004 Aug 25. PMID 15329406, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cGMP-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
PKG

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001204625.1 → NP_001191554.1  PKG

    See identical proteins and their annotated locations for NP_001191554.1

    Status: PROVISIONAL

    Source sequence(s)
    AY362340
    UniProtKB/TrEMBL
    Q6USR9
    Related
    NP_001191554.1, NM_001204625.1
    Conserved Domains (5) summary
    PTZ00263
    Location:413 → 716
    PTZ00263; protein kinase A catalytic subunit; Provisional
    smart00133
    Location:684 → 713
    S_TK_X; Extension to Ser/Thr-type protein kinases
    COG0664
    Location:149 → 259
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    cd00038
    Location:270 → 384
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cd05572
    Location:429 → 689
    STKc_cGK; Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG)

RefSeqs of Annotated Genomes: Aplysia californica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AplCal3.0 Primary Assembly

Genomic

  1. NW_004797452.1 Reference AplCal3.0 Primary Assembly

    Range
    229473..413460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases