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LOC100533728 endogenous retrovirus group FRD member 1, envelope pseudogene [ Homo sapiens (human) ]

Gene ID: 100533728, updated on 10-Dec-2024

Summary

Gene symbol
LOC100533728
Gene description
endogenous retrovirus group FRD member 1, envelope pseudogene
See related
Ensembl:ENSG00000274398
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LOC100533728 in Genome Data Viewer
Location:
Xq13.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (76250227..76251796, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (74684132..74685701, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (75470626..75472195, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MMADHC pseudogene 1 Neighboring gene RNA, U6 small nuclear 867, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:75548305-75548928 Neighboring gene lactate dehydrogenase B pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29776 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29777 Neighboring gene MAGE family member E1

Genomic regions, transcripts, and products

General gene information

Other Names

  • HERV-FRD provirus ancestral Env polyprotein pseudogene
  • endogenous retrovirus group FRD member 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_028789.1 

    Range
    101..1670
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    76250227..76251796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    74684132..74685701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)