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cxcr5 C-X-C motif chemokine receptor 5 [ Danio rerio (zebrafish) ]

Gene ID: 100537421, updated on 3-Dec-2024

Summary

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Gene symbol
cxcr5
Gene description
C-X-C motif chemokine receptor 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
human mouse all
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Genomic context

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See cxcr5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (43890915..43894129)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (43897199..43900862)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene trehalase (brush-border membrane glycoprotein) Neighboring gene DEAD (Asp-Glu-Ala-Asp) box helicase 6 Neighboring gene bcl9 like Neighboring gene V-set and immunoglobulin domain-containing protein 10-like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
C-X-C chemokine receptor type 5
Names
chemokine (C-X-C motif) receptor 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    43890915..43894129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021467875.2 → XP_021323550.2  C-X-C chemokine receptor type 5

    UniProtKB/TrEMBL
    A0A8M9PQZ3
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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