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DPH7 diphthamide biosynthesis 7 [ Canis lupus familiaris (dog) ]

Gene ID: 100688792, updated on 17-Aug-2024

Summary

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Official Symbol
DPH7provided by VGNC
Official Full Name
diphthamide biosynthesis 7provided by VGNC
Primary source
VGNC:VGNC:53234
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
WDR85
Orthologs
human mouse all
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Genomic context

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See DPH7 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (49072398..49082298)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (47397525..47407424)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (48194235..48204140)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (47848791..47858690)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (48147765..48157670)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene arrestin domain containing 1 Neighboring gene zinc finger MYND-type containing 19 Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene patatin like phospholipase domain containing 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diphthine methyltransferase
Names
WD repeat domain 85
XP_022279222.1
XP_038342659.1
XP_038404526.1
XP_038468466.1
XP_038533744.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    49072398..49082298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038677816.1 → XP_038533744.1  diphthine methyltransferase

    Conserved Domains (2) summary
    COG2319
    Location:11 → 180
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:20 → 59
    7WD40; WD40 repeat [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    47848791..47858690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038486731.1 → XP_038342659.1  diphthine methyltransferase

    Conserved Domains (2) summary
    COG2319
    Location:11 → 180
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:20 → 59
    7WD40; WD40 repeat [structural motif]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    48147765..48157670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038612538.1 → XP_038468466.1  diphthine methyltransferase

    Conserved Domains (2) summary
    COG2319
    Location:11 → 180
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:20 → 59
    7WD40; WD40 repeat [structural motif]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    48194235..48204140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038548598.1 → XP_038404526.1  diphthine methyltransferase

    Conserved Domains (2) summary
    COG2319
    Location:11 → 180
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:20 → 59
    7WD40; WD40 repeat [structural motif]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    47397525..47407424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022423514.2 → XP_022279222.1  diphthine methyltransferase

    Conserved Domains (2) summary
    COG2319
    Location:11 → 180
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:20 → 59
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
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