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znf451 zinc finger protein 451 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100698201, updated on 8-Mar-2024

Summary

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Gene symbol
znf451
Gene description
zinc finger protein 451
See related
Ensembl:ENSONIG00000009746
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
human zebrafish all
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Genomic context

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See znf451 in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
17
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG13 NC_031978.2 (19988026..19996497)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG13 NC_031978.1 (12070479..12078917)

Linkage Group LG13 - NC_031978.2Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(IX) chain Neighboring gene dystonin Neighboring gene plectin-like Neighboring gene BCL2 associated athanogene 2 Neighboring gene RAB23, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 SUMO-protein ligase ZNF451

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031978.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    19988026..19996497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005474066.4 → XP_005474123.1  E3 SUMO-protein ligase ZNF451 isoform X2

  2. XM_005474068.4 → XP_005474125.1  E3 SUMO-protein ligase ZNF451 isoform X3

    See identical proteins and their annotated locations for XP_005474125.1

  3. XM_013269120.3 → XP_013124574.1  E3 SUMO-protein ligase ZNF451 isoform X1

    UniProtKB/TrEMBL
    I3JTP6
    Related
    ENSONIP00000012241.2, ENSONIT00000012250.2

  4. XM_005474067.4 → XP_005474124.1  E3 SUMO-protein ligase ZNF451 isoform X3

    See identical proteins and their annotated locations for XP_005474124.1

  5. XM_005474070.4 → XP_005474127.1  E3 SUMO-protein ligase ZNF451 isoform X3

    See identical proteins and their annotated locations for XP_005474127.1

  6. XM_013269121.3 → XP_013124575.1  E3 SUMO-protein ligase ZNF451 isoform X3

  7. XM_019366396.2 → XP_019221941.1  E3 SUMO-protein ligase ZNF451 isoform X3

  8. XM_005474071.4 → XP_005474128.1  E3 SUMO-protein ligase ZNF451 isoform X3

    See identical proteins and their annotated locations for XP_005474128.1

Nucleotide Protein
Heading Accession and Version

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